SPARQL example query 109_uniprot_transporter_in_liver
109_uniprot_transporter_in_liver: Find human transporter proteins in reviewed UniProtKB/Swiss-Prot, that are expressed in the liver (Uses Bgee and UBERON).
PREFIX genex: <http://purl.org/genex#> PREFIX lscr: <http://purl.org/lscr#> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX orth: <http://purl.org/net/orth#> PREFIX rh: <http://rdf.rhea-db.org/> PREFIX taxon: <http://purl.uniprot.org/taxonomy/> PREFIX uberon: <http://purl.obolibrary.org/obo/uo#> PREFIX up: <http://purl.uniprot.org/core/> SELECT ?rhea ?protein ?anat WHERE { GRAPH <https://sparql.rhea-db.org/rhea> { ?rhea rh:isTransport true . } ?protein up:annotation ?ann . ?protein up:organism taxon:9606 . ?ann up:catalyticActivity ?ca . ?ca up:catalyzedReaction ?rhea . BIND(uberon:0002107 AS ?anat) SERVICE <https://www.bgee.org/sparql/> { ?seq genex:isExpressedIn ?anat . ?seq lscr:xrefUniprot ?protein . ?seq orth:organism ?organism . ?organism obo:RO_0002162 taxon:9606 . } }Use